Browsing by Author "9c8c2961-46ad-47d5-bb5d-091583dcfe8e"

Now showing items 1-4 of 4

    • Editorial: User-friendly tools applied to genetics or systems biology 
      Nakaya, Helder I.; Thakar, Juilee; Maracaja Coutinho, Vinicius (Frontiers Media, 2020)
    • Genomic positional conservation identifies topological anchor point RNAs linked to developmental loci 
      Amaral, Paulo P.; Leonardi, Tommaso; Han, Namshik; Vire, Emmanuelle; Gascoigne, Dennis K.; Arias Carrasco, Raúl; Buscher, Magdalena; Pandolfini, Luca; Zhang, Anda; Pluchino, Stefano; Maracaja Coutinho, Vinicius; Nakaya, Helder I.; Hemberg, Martin; Shiekhattar, Ramin; Enright, Anton J.; Kouzarides, Tony (BIOMED Central Ltd., 2018)
      Background: The mammalian genome is transcribed into large numbers of long noncoding RNAs (lncRNAs), but the definition of functional lncRNA groups has proven difficult, partly due to their low sequence conservation and ...
    • StructRNAfinder: an automated pipeline and web server for RNA families prediction 
      Arias Carrasco, Raúl; Vásquez Moran, Yessenia; Nakaya, Helder I.; Maracaja Coutinho, Vinicius (BIOMED Central Ltd., 2018)
      Background: The function of many noncoding RNAs (ncRNAs) depend upon their secondary structures. Over the last decades, several methodologies have been developed to predict such structures or to use them to functionally ...
    • WebCEMiTool: Co-expression modular analysis made easy 
      Cardozo, Lucas E.; Russo, Pedro S.T.; Gomes-Correia, Bruno; Araujo-Pereira, Mariana; Sepúlveda-Hermosilla, Gonzalo; Maracaja-Coutinho, Vinicius; Nakaya, Helder I. (Frontiers Media S.A., 2019)
      Co-expression analysis has been widely used to elucidate the functional architecture of genes under different biological processes. Such analysis, however, requires substantial knowledge about programming languages and/or ...