Browsing by Author "8c501111-f03d-412f-a221-11f5e3b94650"

Now showing items 1-14 of 14

    • A Multi-Serotype Approach Clarifies the Catabolite Control Protein A Regulon in the Major Human Pathogen ... 
      DebRoy, Sruti; Saldaña, Miguel; Travisany, Dante; Montano, Andrew; Galloway Peña, Jessica; Horstmann, Nicola; Yao, Hui; González Canales, Mauricio; Maass Sepúlveda, Alejandro; Latorre Mora, Mauricio; Shelburne, Samuel (Nature Publishing Group, 2016)
      Catabolite control protein A (CcpA) is a highly conserved, master regulator of carbon source utilization in gram-positive bacteria, but the CcpA regulon remains ill-defined. In this study we aimed to clarify the CcpA regulon ...
    • Draft genome sequence of the sulfobacillus thermosulfidooxidans cutipay strain, an indigenous bacterium ... 
      Travisany, Dante; Di Genova, Alex; Sepúlveda, Andrea; Bobadilla-Fazzini, Roberto A.; Parada, Pilar; Maass Sepúlveda, Alejandro (2012)
      Sulfobacillus thermosulfidooxidans strain Cutipay is a mixotrophic, acidophilic, moderately thermophilic bacterium isolated from mining environments of the north of Chile, making it an interesting subject for studying the ...
    • Expression of two indole-3-acetic acid (IAA)-amido synthetase (GH3) genes during fruit development of ... 
      Bernales, Maricarmen; Monsalve, Liliam; Ayala Raso, Aníbal; Valdenegro, Monika; Torres Martínez, Juan Pablo; Travisany, Dante; Defilippi, Bruno G.; González Agüero, Mauricio; Cherian, Sam; Fuentes, Lida (Elsevier, 2019)
      The conjugation of indole-3-acetic acid (IAA) to amino acids by indole-3-acetic acid (IAA)-amido synthetases (GH3) is an important part of auxin level regulation. However, the auxin conjugation during development of soft ...
    • Generation and robustness of Boolean networks to model Clostridium difficile infection 
      Travisany, Dante; Goles, Eric; Latorre, Mauricio; Cortés, María Paz; Maass Sepúlveda, Alejandro (Springer Netherlands, 2020)
      One of the more common healthcare associated infection is Chronic diarrhea. This disease is caused by the bacterium Clostridium difficile which alters the normal composition of the human gut flora. The most successful ...
    • Global gene expression analysis provides insight into local adaptation to geothermal streams in tadpoles ... 
      Pastenes, Luis; Valdivieso, Camilo; Di Genova, Alex; Travisany, Dante; Hart, Andrew; Montecino, Martín; Orellana, Ariel; Gonzalez, Mauricio; Gutiérrez, Rodrigo A.; Allende Connelly, Miguel; Maass Sepúlveda, Alejandro; Méndez, Marco A. (Nature Publishing Group, 2017)
      © 2017 The Author(s). The anuran Rhinella spinulosa is distributed along the Andes Range at altitudes that undergo wide daily and seasonal variation in temperature. One of the populations inhabits geothermal streams, a ...
    • Global proteomic profiling of piscirickettsia salmonis and salmon macrophage-like cells during intracellular ... 
      Ortiz Severín, Javiera; Travisany, Dante; Maass Sepúlveda, Alejandro; Cambiazo Ayala, Verónica; Chávez Espinosa, Francisco (MDPI, 2020)
      Piscirickettsiasalmonis is an intracellular bacterial fish pathogen that causes piscirickettsiosis, a disease with numerous negative impacts in the Chilean salmon farming industry. Although transcriptomic studies of P. ...
    • High-throughput single nucleotide polymorphism (SNP) discovery and validation through whole-genome resequencing ... 
      Yáñez López, José; Yoshida, Grazyella; Barría, Agustín; Palma Véjares, Ricardo; Travisany, Dante; Díaz Madrid, Diego; Cáceres Cruz, Giovanna; Cádiz, María I.; López, María E.; Lhorente, Jean P.; Jedlicki, Ana; Soto, José; Salas, Diego; Maass Sepúlveda, Alejandro (Springer, 2020)
      Nile tilapia (Oreochromis niloticus) is the second most important farmed fish in the world and a sustainable source of protein for human consumption. Several genetic improvement programs have been established for this ...
    • Integration of biological networks for Acidithiobacillus thiooxidans Describes a modular gene regulatory ... 
      Cortés Burgos, María Paz; Acuña Aguayo, Vicente; Travisany Flores, Dante; Siegel, Anne; Maass Sepúlveda, Alejandro; Latorre, Mauricio (Frontiers Media, 2020)
      Acidithiobacillus thiooxidansis one of the most studied biomining species, highlighting its ability to oxidize reduced inorganic sulfur compounds, coupled with its elevated capacity to live under an elevated concentration ...
    • Reconstruction of the microalga Nannochloropsis salina genome-scale metabolic model with applications to ... 
      Loira, Nicolás; Mendoza, Sebastián; Cortés, María Paz; Rojas, Natalia; Travisany, Dante; Di Genova, Alex; Gajardo, Natalia; Ehrenfeld, Nicole; Maass Sepúlveda, Alejandro (Biomed Central Ltd., 2017)
      Background: Nannochloropsis salina (= Eustigmatophyceae) is a marine microalga which has become a biotechnological target because of its high capacity to produce polyunsaturated fatty acids and triacylglycerols. It has ...
    • RNA-Seq analysis and transcriptome assembly of raspberry fruit (Rubus idaeus ¨Heritage¨) revealed several ... 
      Travisany, Dante; Ayala-Raso, Anibal; Di Genova, Alex; Monsalve, Liliam; Bernales, Maricarmen; Martínez, Juan Pablo; González Agüero, Mauricio; Defilippi, Bruno; Cherian, Sam; Maass Sepúlveda, Alejandro; Fuentes, Lida (Elsevier B.V., 2019)
      Using Illumina HiSeq ™ 2000 sequencing platform (100 bp double-end reads), we performed transcriptome analysis of flower (F), green (G) and pink (P) fruit stages of red raspberry. Transcriptome was obtained by the de-novo ...
    • Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ... 
      Mandakovic Seyler, Dinka; Rojas, Claudia; Maldonado, Jonathan; Latorre Mora, Mauricio; Travisany, Dante; Delage, Erwan; Bihouee, Audrey; Jean, Geraldine; Díaz, Francisca; Fernández Gómez, Beatriz; Cabrera, Pablo; Gaete, Alexis; Latorre, Claudio; Gutiérrez, Rodrigo A.; Maass Sepúlveda, Alejandro; Cambiazo Ayala, Liliana; Navarrete, Sergio A.; Eveillard, Damien; González Canales, Mauricio (Nature Publishing Group, 2018)
      Understanding the factors that modulate bacterial community assembly in natural soils is a longstanding challenge in microbial community ecology. In this work, we compared two microbial co-occurrence networks representing ...
    • Symbolic Extensions Applied to Multiscale Structure of Genomes 
      Downarowicz, Tomasz; Travisany, Dante; Montecino, Martín; Maass Sepúlveda, Alejandro (Kluwer Academic Publishers, 2014)
      A genome of a living organism consists of a long string of symbols over a finite alphabet carrying critical information for the organism. This includes its ability to control post natal growth, homeostasis, adaptation to ...
    • The bioleaching potential of a bacterial consortium 
      Latorre Mora, Mauricio; Cortés Burgos, María Paz; Travisany, Dante; Di Genova, Alex; Budinich Abarca, Marko; Reyes Jara, Angélica; Hödar Quiroga, Christian; González Canales, Mauricio; Parada, Pilar; Bobadilla Fazzini, Roberto; Cambiazo Ayala, Liliana; Maass Sepúlveda, Alejandro (Elsevier, 2016)
      This work presents the molecular foundation of a consortium of five efficient bacteria strains isolated from copper mines currently used in state of the art industrial-scale biotechnology. The strains Acidithiobacillus ...
    • Transcriptomic changes of piscirickettsia salmonis during intracellular growth in a salmon macrophage-like ... 
      Zúñiga Prado, Alejandro; Aravena Espinoza, Pamela; Pulgar Tejo, Rodrigo; Travisany, Dante; Ortiz Severín, Javiera; Chávez Espinosa, Francisco; Maass Sepúlveda, Alejandro; González Canales, Mauricio; Cambiazo Ayala, Liliana (Frontiers Media, 2020)
      Piscirickettsia salmonis is the causative agent of Piscirickettsiosis, a systemic infection of salmonid fish species. P. salmonis infects and survives in its host cell, a process that correlates with the expression of ...